SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_001001059
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Kidney
Biosample name: A-498_emptyvector
Genomic region: chr6:24655596-24666990
Size: 11394
Super-enhancer rank 1059
Number of SE elements: 3
ChIP density(Case|Control): 30983.7042|475.1298
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: TDP2 ;
ROSE Overlap TDP2 ;
ROSE Proximal KIAA0319 ; ACOT13 ;
ROSE Closest TDP2 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA KIAA0319 ; TDP2 ; ACOT13 ; C6orf62 ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_001001059 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers