SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_001001008
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Kidney
Biosample name: A-498_emptyvector
Genomic region: chr11:2911915-2954106
Size: 42191
Super-enhancer rank 1008
Number of SE elements: 8
ChIP density(Case|Control): 34740.0694|3290.898
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: PHLDA2 ;
ROSE Overlap PHLDA2 ; SLC22A18 ; NAP1L4 ;
ROSE Proximal SNORA54 ; CDKN1C ; SLC22A18AS ; KCNQ1DN ;
ROSE Closest PHLDA2 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA NAP1L4 ; CDKN1C ; KCNQ1DN ; SLC22A18 ; SLC22A18AS ; KCNQ1-AS1 ; SNORA54 ; PHLDA2 ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_001001008 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers