SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_001001006
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Kidney
Biosample name: A-498_emptyvector
Genomic region: chr6:36576503-36597084
Size: 20581
Super-enhancer rank 1006
Number of SE elements: 6
ChIP density(Case|Control): 33034.5631|1467.4253
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: SRSF3 ;
ROSE Overlap SRSF3 ;
ROSE Proximal MIR3925 ; STK38 ;
ROSE Closest SRSF3 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA CDKN1A ; STK38 ; MIR3925 ; SRSF3 ; PANDAR ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_001001006 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers