SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_001001002
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Kidney
Biosample name: A-498_emptyvector
Genomic region: chr12:52921011-52928007
Size: 6996
Super-enhancer rank 1002
Number of SE elements: 2
ChIP density(Case|Control): 32024.19|395.9736
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: KRT8 ;
ROSE Overlap ;
ROSE Proximal KRT8 ; KRT18 ;
ROSE Closest KRT8 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA KRT79 ; KRT78 ; KRT18 ; EIF4B ; KRT8 ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_001001002 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers