SEdb 3.0
  1. Search
  2. Super-enhancer search result
  3. Super-enhancer detail

Super-enhancer overview

SE ID: SE_02_001000999
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Kidney
Biosample name: A-498_emptyvector
Genomic region: chr1:201737333-201767162
Size: 29829
Super-enhancer rank 999
Number of SE elements: 9
ChIP density(Case|Control): 34882.0326|3173.8056
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: NAV1 ;
ROSE Overlap NAV1 ;
ROSE Proximal MIR1231 ;
ROSE Closest NAV1 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA MIR1231 ; IPO9-AS1 ; NAV1 ; IPO9 ; MIR5191 ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_001000999 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
Download bed

Overlap with other super-enhancers