SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_001000988
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Kidney
Biosample name: A-498_emptyvector
Genomic region: chr2:182358563-182373983
Size: 15420
Super-enhancer rank 988
Number of SE elements: 4
ChIP density(Case|Control): 33267.108|1210.47
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: PDE1A ;
ROSE Overlap PDE1A ;
ROSE Proximal ;
ROSE Closest PDE1A ;
Lasso ;
PreSTIGE ;
ABC ;
BETA PDE1A ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_001000988 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers