SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_001000954
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Kidney
Biosample name: A-498_emptyvector
Genomic region: chr20:5060829-5081753
Size: 20924
Super-enhancer rank 954
Number of SE elements: 9
ChIP density(Case|Control): 34422.0724|1801.5564
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: C20ORF30 ;
ROSE Overlap ;
ROSE Proximal PCNA ; CDS2 ; PCNA-AS1 ; C20orf30 ;
ROSE Closest C20orf30 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA PCNA-AS1 ; TMEM230 ; SLC23A2 ; CDS2 ; PCNA ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_001000954 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers