SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_001000945
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Kidney
Biosample name: A-498_emptyvector
Genomic region: chr16:30993937-30999702
Size: 5765
Super-enhancer rank 945
Number of SE elements: 2
ChIP density(Case|Control): 33092.8295|281.332
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: HSD3B7 ;
ROSE Overlap STX1B ;
ROSE Proximal ORAI3 ; STX4 ; HSD3B7 ; SETD1A ;
ROSE Closest HSD3B7 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA ZNF646 ; HSD3B7 ; ORAI3 ; ZNF668 ; STX1B ; FBXL19 ; VKORC1 ; PRSS53 ; STX4 ; SETD1A ; FBXL19-AS1 ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_001000945 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers