SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_001000911
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Kidney
Biosample name: A-498_emptyvector
Genomic region: chr17:17820203-17850423
Size: 30220
Super-enhancer rank 911
Number of SE elements: 5
ChIP density(Case|Control): 38306.872|4656.902
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: SREBF1 ;
ROSE Overlap SREBF1 ; TOM1L2 ;
ROSE Proximal MIR33B ; SMCR5 ;
ROSE Closest SREBF1 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA MIR33B ; RAI1-AS1 ; SREBF1 ; MIR6777 ; SMCR5 ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_001000911 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers