SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_001000873
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Kidney
Biosample name: A-498_emptyvector
Genomic region: chrX:154526832-154545892
Size: 19060
Super-enhancer rank 873
Number of SE elements: 4
ChIP density(Case|Control): 36364.5758|2003.3111
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: IKBKG ;
ROSE Overlap G6PD ; IKBKG ;
ROSE Proximal UBL4A ; FAM3A ; NCRNA00204B ; IKBKG ; CTAG1B ; LAGE3 ; SLC10A3 ;
ROSE Closest IKBKG ;
Lasso ;
PreSTIGE ;
ABC ;
BETA IKBKG ; GDI1 ; FAM3A ; FAM223B ; MIR6858 ; G6PD ; LAGE3 ; CTAG1B ; PLXNA3 ; SLC10A3 ; FAM223A ; UBL4A ; CTAG1A ; FAM50A ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_001000873 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers