SEdb 3.0
  1. Search
  2. Super-enhancer search result
  3. Super-enhancer detail

Super-enhancer overview

SE ID: SE_02_001000861
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Kidney
Biosample name: A-498_emptyvector
Genomic region: chr13:52346730-52363761
Size: 17031
Super-enhancer rank 861
Number of SE elements: 4
ChIP density(Case|Control): 35698.6791|1083.1716
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: THSD1 ;
ROSE Overlap ;
ROSE Proximal THSD1 ;
ROSE Closest THSD1 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA THSD1 ; VPS36 ; LOC103191607 ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_001000861 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
Download bed

Overlap with other super-enhancers