SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_001000838
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Kidney
Biosample name: A-498_emptyvector
Genomic region: chr19:14505496-14527650
Size: 22154
Super-enhancer rank 838
Number of SE elements: 9
ChIP density(Case|Control): 36875.333|1670.4116
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: DNAJB1 ;
ROSE Overlap DNAJB1 ;
ROSE Proximal GIPC1 ; MIR639 ; NDUFB7 ; LOC100130932 ; PTGER1 ; TECR ;
ROSE Closest DNAJB1 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA TECR ; GIPC1 ; DNAJB1 ; PTGER1 ; CLEC17A ; NDUFB7 ; DDX39A ; PKN1 ; MIR639 ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_001000838 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers