SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_001000827
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Kidney
Biosample name: A-498_emptyvector
Genomic region: chr19:45568136-45586077
Size: 17941
Super-enhancer rank 827
Number of SE elements: 4
ChIP density(Case|Control): 36994.342|1440.6623
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: OPA3 ;
ROSE Overlap OPA3 ;
ROSE Proximal GPR4 ;
ROSE Closest OPA3 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA EML2 ; GIPR ; C19orf83 ; MIR642A ; GPR4 ; VASP ; MIR642B ; PPM1N ; OPA3 ; RTN2 ; MIR330 ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_001000827 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers