SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_001000816
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Kidney
Biosample name: A-498_emptyvector
Genomic region: chr1:15780768-15802434
Size: 21666
Super-enhancer rank 816
Number of SE elements: 5
ChIP density(Case|Control): 37124.691|1265.2944
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: FBLIM1 ;
ROSE Overlap FBLIM1 ;
ROSE Proximal UQCRHL ; FBLIM1 ; TMEM82 ; SPEN ; SLC25A34 ; FLJ37453 ;
ROSE Closest UQCRHL ;
Lasso ;
PreSTIGE ;
ABC ;
BETA SLC25A34 ; UQCRHL ; FBLIM1 ; FLJ37453 ; TMEM82 ; MIR5096 ; SPEN ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_001000816 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers