SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_001000786
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Kidney
Biosample name: A-498_emptyvector
Genomic region: chr4:102806868-102830134
Size: 23266
Super-enhancer rank 786
Number of SE elements: 5
ChIP density(Case|Control): 37751.4116|1126.0744
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: UBE2D3 ;
ROSE Overlap UBE2D3 ;
ROSE Proximal CISD2 ; MANBA ; UBE2D3 ;
ROSE Closest UBE2D3 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA UBE2D3 ; LOC102723704 ; MANBA ; CISD2 ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_001000786 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers