SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_001000781
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Kidney
Biosample name: A-498_emptyvector
Genomic region: chr19:10730570-10770795
Size: 40225
Super-enhancer rank 781
Number of SE elements: 14
ChIP density(Case|Control): 40928.9375|4207.535
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: MIR638 ;
ROSE Overlap DNM2 ;
ROSE Proximal DNM2 ; MIR199A1 ; QTRT1 ; MIR638 ;
ROSE Closest MIR638 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA MIR199A1 ; MIR4748 ; MIR6793 ; DNM2 ; ILF3 ; MIR638 ; TMED1 ; QTRT1 ; C19orf38 ; ILF3-AS1 ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_001000781 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers