SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_001000741
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Kidney
Biosample name: A-498_emptyvector
Genomic region: chr19:608696-632461
Size: 23765
Super-enhancer rank 741
Number of SE elements: 4
ChIP density(Case|Control): 39746.9625|1853.67
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: POLRMT ;
ROSE Overlap HCN2 ; POLRMT ;
ROSE Proximal RNF126 ; FGF22 ; BSG ; FSTL3 ;
ROSE Closest POLRMT ;
Lasso ;
PreSTIGE ;
ABC ;
BETA POLRMT ; BSG ; FSTL3 ; HCN2 ; GZMM ; PALM ; FGF22 ; RNF126 ; PRSS57 ; CDC34 ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_001000741 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers