SEdb 3.0
  1. Search
  2. Super-enhancer search result
  3. Super-enhancer detail

Super-enhancer overview

SE ID: SE_02_001000739
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Kidney
Biosample name: A-498_emptyvector
Genomic region: chr12:109444853-109465440
Size: 20587
Super-enhancer rank 739
Number of SE elements: 5
ChIP density(Case|Control): 39839.9624|1924.8845
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: KCTD10 ;
ROSE Overlap MYO1H ; KCTD10 ;
ROSE Proximal UBE3B ;
ROSE Closest KCTD10 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA UBE3B ; KCTD10 ; LINC01486 ; MYO1H ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_001000739 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
Download bed

Overlap with other super-enhancers