SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_001000729
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Kidney
Biosample name: A-498_emptyvector
Genomic region: chr20:19964208-19995006
Size: 30798
Super-enhancer rank 729
Number of SE elements: 6
ChIP density(Case|Control): 42658.3098|4367.1564
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: NAA20 ;
ROSE Overlap RIN2 ;
ROSE Proximal NAA20 ;
ROSE Closest NAA20 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA CFAP61 ; NAA20 ; CRNKL1 ; RIN2 ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_001000729 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers