SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_001000688
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Kidney
Biosample name: A-498_emptyvector
Genomic region: chr20:32732171-32778405
Size: 46234
Super-enhancer rank 688
Number of SE elements: 6
ChIP density(Case|Control): 44688.8178|5224.329
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: DNMT3B ;
ROSE Overlap DNMT3B ; COMMD7 ;
ROSE Proximal DNMT3B ; MAPRE1 ; COMMD7 ;
ROSE Closest DNMT3B ;
Lasso ;
PreSTIGE ;
ABC ;
BETA DNMT3B ; MAPRE1 ; COMMD7 ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_001000688 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers