SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_001000656
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Kidney
Biosample name: A-498_emptyvector
Genomic region: chr20:63681415-63707512
Size: 26097
Super-enhancer rank 656
Number of SE elements: 6
ChIP density(Case|Control): 41422.1808|1247.3888
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: TNFRSF6B ;
ROSE Overlap TNFRSF6B ; ARFRP1 ; ZGPAT ; RTEL1 ;
ROSE Proximal ZGPAT ; LIME1 ; SLC2A4RG ; ARFRP1 ; STMN3 ;
ROSE Closest TNFRSF6B ;
Lasso ;
PreSTIGE ;
ABC ;
BETA TNFRSF6B ; STMN3 ; ARFRP1 ; GMEB2 ; ZGPAT ; RTEL1 ; SLC2A4RG ; RTEL1-TNFRSF6B ; LIME1 ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_001000656 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers