SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_001000642
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Kidney
Biosample name: A-498_emptyvector
Genomic region: chr16:4651451-4682852
Size: 31401
Super-enhancer rank 642
Number of SE elements: 7
ChIP density(Case|Control): 44966.232|4418.1207
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: NUDT16L1 ;
ROSE Overlap MGRN1 ;
ROSE Proximal NUDT16L1 ; FAM100A ;
ROSE Closest NUDT16L1 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA MGRN1 ; UBALD1 ; ANKS3 ; MIR6769A ; C16orf71 ; NUDT16L1 ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_001000642 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers