SEdb 3.0
  1. Search
  2. Super-enhancer search result
  3. Super-enhancer detail

Super-enhancer overview

SE ID: SE_02_001000633
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Kidney
Biosample name: A-498_emptyvector
Genomic region: chr7:74847704-74852480
Size: 4776
Super-enhancer rank 633
Number of SE elements: 2
ChIP density(Case|Control): 42659.9649|1858.7817
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: GTF2IRD2 ;
ROSE Overlap GTF2IRD2 ;
ROSE Proximal PMS2P5 ; STAG3L2 ;
ROSE Closest GTF2IRD2 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA GTF2IRD2 ; PMS2P5 ; STAG3L2 ; NCF1 ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_001000633 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
Download bed

Overlap with other super-enhancers