SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_001000628
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Kidney
Biosample name: A-498_emptyvector
Genomic region: chr1:151057719-151065907
Size: 8188
Super-enhancer rank 628
Number of SE elements: 3
ChIP density(Case|Control): 42106.79|869.5656
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: MLLT11 ;
ROSE Overlap MLLT11 ; CDC42SE1 ;
ROSE Proximal C1orf56 ; BNIPL ; FAM63A ; GABPB2 ; PRUNE ; CDC42SE1 ;
ROSE Closest MLLT11 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA FAM63A ; PRUNE ; CERS2 ; C1orf56 ; SEMA6C ; TNFAIP8L2-SCNM1 ; MLLT11 ; CDC42SE1 ; BNIPL ; GABPB2 ; TNFAIP8L2 ; ANXA9 ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_001000628 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers