SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_001000587
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Kidney
Biosample name: A-498_emptyvector
Genomic region: chr1:205171406-205180548
Size: 9142
Super-enhancer rank 587
Number of SE elements: 2
ChIP density(Case|Control): 43333.08|945.2828
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: DSTYK ;
ROSE Overlap DSTYK ;
ROSE Proximal TMCC2 ; RBBP5 ;
ROSE Closest DSTYK ;
Lasso ;
PreSTIGE ;
ABC ;
BETA TMCC2 ; DSTYK ; RBBP5 ; TMEM81 ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_001000587 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers