SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_001000584
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Kidney
Biosample name: A-498_emptyvector
Genomic region: chr16:67164743-67186718
Size: 21975
Super-enhancer rank 584
Number of SE elements: 7
ChIP density(Case|Control): 43492.92|962.505
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: NOL3 ;
ROSE Overlap NOL3 ; HSF4 ; EXOC3L ; KIAA0895L ;
ROSE Proximal LRRC29 ; FBXL8 ; ELMO3 ; E2F4 ; B3GNT9 ; TRADD ; MIR328 ; TMEM208 ;
ROSE Closest NOL3 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA B3GNT9 ; NOL3 ; HSF4 ; TMEM208 ; KIAA0895L ; FHOD1 ; EXOC3L1 ; FBXL8 ; E2F4 ; LRRC29 ; ELMO3 ; C16orf70 ; MIR328 ; TRADD ; SLC9A5 ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_001000584 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers