SEdb 2.0
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Super-enhancer overview

SE ID: SE_02_001000579
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Kidney
Biosample name: A-498_emptyvector
Genomic region: chr16:56605353-56611618
Size: 6265
Super-enhancer rank 579
Number of SE elements: 1
ChIP density(Case|Control): 43190.91|283.178
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: MT2A;
ROSE Overlap MT2A;
ROSE Proximal MT4; MT1E; MT1A; MT3; MT1DP; MT1M; MT1L; MT1B; MT1JP; MT1F;
ROSE Closest MT2A;
Lasso ;
PreSTIGE ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_001000579 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
GREAT Download bed

Overlap with other super-enhancers