SEdb 3.0
  1. Search
  2. Super-enhancer search result
  3. Super-enhancer detail

Super-enhancer overview

SE ID: SE_02_001000560
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Kidney
Biosample name: A-498_emptyvector
Genomic region: chr10:125081438-125087619
Size: 6181
Super-enhancer rank 560
Number of SE elements: 2
ChIP density(Case|Control): 44026.6449|472.2284
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: MIR4296 ;
ROSE Overlap CTBP2 ;
ROSE Proximal MIR4296 ;
ROSE Closest MIR4296 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA MIR4296 ; CTBP2 ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_001000560 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
Download bed

Overlap with other super-enhancers