SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_001000554
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Kidney
Biosample name: A-498_emptyvector
Genomic region: chr7:73704346-73721873
Size: 17527
Super-enhancer rank 554
Number of SE elements: 5
ChIP density(Case|Control): 45940.0197|1992.8199
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: MIR4284 ;
ROSE Overlap MIR4284 ; STX1A ;
ROSE Proximal ABHD11 ; STX1A ; DNAJC30 ; WBSCR26 ; CLDN3 ; WBSCR22 ; VPS37D ;
ROSE Closest MIR4284 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA DNAJC30 ; MLXIPL ; CLDN3 ; ABHD11 ; WBSCR22 ; STX1A ; MIR4284 ; VPS37D ; ABHD11-AS1 ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_001000554 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers