SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_001000544
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Kidney
Biosample name: A-498_emptyvector
Genomic region: chr2:10400835-10414264
Size: 13429
Super-enhancer rank 544
Number of SE elements: 4
ChIP density(Case|Control): 46042.6694|1434.2172
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: SNORA80B ;
ROSE Overlap HPCAL1 ;
ROSE Proximal ODC1 ; SNORA80B ;
ROSE Closest SNORA80B ;
Lasso ;
PreSTIGE ;
ABC ;
BETA ODC1 ; HPCAL1 ; SNORA80B ; LOC101929715 ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_001000544 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers