SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_001000527
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Kidney
Biosample name: A-498_emptyvector
Genomic region: chr19:34994191-35007651
Size: 13460
Super-enhancer rank 527
Number of SE elements: 6
ChIP density(Case|Control): 47852.992|2565.476
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: GRAMD1A ;
ROSE Overlap GRAMD1A ;
ROSE Proximal ZNF792 ; HPN ; SCN1B ;
ROSE Closest GRAMD1A ;
Lasso ;
PreSTIGE ;
ABC ;
BETA GRAMD1A ; ZNF30 ; ZNF30-AS1 ; SCN1B ; ZNF792 ; HPN ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_001000527 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers