SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_001000525
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Kidney
Biosample name: A-498_emptyvector
Genomic region: chr1:150998422-151023840
Size: 25418
Super-enhancer rank 525
Number of SE elements: 6
ChIP density(Case|Control): 48967.777|3550.8946
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: PRUNE ;
ROSE Overlap PRUNE ; FAM63A ;
ROSE Proximal LASS2 ; ANXA9 ; BNIPL ; MLLT11 ; FAM63A ; GABPB2 ; C1orf56 ; CDC42SE1 ;
ROSE Closest PRUNE ;
Lasso ;
PreSTIGE ;
ABC ;
BETA FAM63A ; SETDB1 ; PRUNE ; CERS2 ; C1orf56 ; MLLT11 ; CDC42SE1 ; BNIPL ; GABPB2 ; ANXA9 ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_001000525 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers