SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_001000518
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Kidney
Biosample name: A-498_emptyvector
Genomic region: chr9:130110711-130151476
Size: 40765
Super-enhancer rank 518
Number of SE elements: 7
ChIP density(Case|Control): 50487.4525|4720.587
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: NCS1 ;
ROSE Overlap GPR107 ;
ROSE Proximal NCS1 ;
ROSE Closest NCS1 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA GPR107 ; NCS1 ; FNBP1 ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_001000518 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers