SEdb 3.0
  1. Search
  2. Super-enhancer search result
  3. Super-enhancer detail

Super-enhancer overview

SE ID: SE_02_001000483
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Kidney
Biosample name: A-498_emptyvector
Genomic region: chr3:159761748-159798917
Size: 37169
Super-enhancer rank 483
Number of SE elements: 5
ChIP density(Case|Control): 50932.6807|3408.3973
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: SCHIP1 ;
ROSE Overlap IQCJ-SCHIP1 ; SCHIP1 ;
ROSE Proximal SCHIP1 ;
ROSE Closest SCHIP1 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA SCHIP1 ; IQCJ-SCHIP1-AS1 ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_001000483 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
Download bed

Overlap with other super-enhancers