SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_001000474
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Kidney
Biosample name: A-498_emptyvector
Genomic region: chr1:225734672-225773069
Size: 38397
Super-enhancer rank 474
Number of SE elements: 7
ChIP density(Case|Control): 53126.0892|5064.5643
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: SRP9 ;
ROSE Overlap ;
ROSE Proximal EPHX1 ; SRP9 ;
ROSE Closest SRP9 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA EPHX1 ; SRP9 ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_001000474 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers