SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_001000472
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Kidney
Biosample name: A-498_emptyvector
Genomic region: chr20:50724672-50764582
Size: 39910
Super-enhancer rank 472
Number of SE elements: 13
ChIP density(Case|Control): 51483.9|3396.341
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: PARD6B ;
ROSE Overlap PARD6B ;
ROSE Proximal BCAS4 ;
ROSE Closest PARD6B ;
Lasso ;
PreSTIGE ;
ABC ;
BETA FAM65C ; BCAS4 ; LOC100506175 ; PARD6B ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_001000472 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers