SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_001000468
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Kidney
Biosample name: A-498_emptyvector
Genomic region: chr9:129124438-129146981
Size: 22543
Super-enhancer rank 468
Number of SE elements: 3
ChIP density(Case|Control): 51217.696|2903.5384
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: PPP2R4 ;
ROSE Overlap PPP2R4 ;
ROSE Proximal DOLPP1 ; IER5L ; CRAT ;
ROSE Closest PPP2R4 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA PPP2R4 ; DOLPP1 ; FAM73B ; CRAT ; IER5L ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_001000468 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers