SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_001000467
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Kidney
Biosample name: A-498_emptyvector
Genomic region: chr19:44724076-44756036
Size: 31960
Super-enhancer rank 467
Number of SE elements: 6
ChIP density(Case|Control): 50996.988|2658.4896
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: BCL3 ;
ROSE Overlap BCL3 ;
ROSE Proximal CEACAM16 ; CBLC ;
ROSE Closest BCL3 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA CBLC ; BCAM ; MIR8085 ; CEACAM19 ; PVR ; BCL3 ; CEACAM16 ; MIR4531 ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_001000467 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers