SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_001000457
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Kidney
Biosample name: A-498_emptyvector
Genomic region: chr21:45362579-45378711
Size: 16132
Super-enhancer rank 457
Number of SE elements: 6
ChIP density(Case|Control): 50548.0088|1284.1072
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: COL18A1 ;
ROSE Overlap ;
ROSE Proximal COL18A1 ; NCRNA00175 ;
ROSE Closest COL18A1 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA COL18A1-AS1 ; POFUT2 ; LOC642852 ; COL18A1 ; LINC00316 ; COL18A1-AS2 ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_001000457 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers