SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_001000437
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Kidney
Biosample name: A-498_emptyvector
Genomic region: chr17:51120990-51134244
Size: 13254
Super-enhancer rank 437
Number of SE elements: 6
ChIP density(Case|Control): 52578.618|1909.9014
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: SPAG9 ;
ROSE Overlap ;
ROSE Proximal NME1-NME2 ; NME2 ; NME1 ; SPAG9 ;
ROSE Closest SPAG9 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA NME2 ; SPAG9 ; NME1-NME2 ; NME1 ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_001000437 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers