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Super-enhancer overview

SE ID: SE_02_001000408
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Kidney
Biosample name: A-498_emptyvector
Genomic region: chr6:26272685-26337190
Size: 64505
Super-enhancer rank 408
Number of SE elements: 11
ChIP density(Case|Control): 55254.983|3134.943
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: HIST1H4H ;
ROSE Overlap HIST1H4H ; HIST1H2BI ;
ROSE Proximal BTN2A2 ; HIST1H1D ; HIST1H3F ; HIST1H2BH ; BTN3A2 ; HIST1H3E ; HIST1H4G ; HIST1H3G ; HIST1H4F ;
ROSE Closest HIST1H4H ;
Lasso ;
PreSTIGE ;
ABC ;
BETA BTN3A1 ; HIST1H3E ; HIST1H4G ; BTN2A2 ; BTN3A2 ; HIST1H4F ; HIST1H2BI ; HIST1H2AE ; HIST1H3F ; HIST1H2BG ; HIST1H3G ; HIST1H2BH ; HIST1H4H ; HIST1H1D ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_001000408 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers