SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_001000377
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Kidney
Biosample name: A-498_emptyvector
Genomic region: chr11:46659430-46716071
Size: 56641
Super-enhancer rank 377
Number of SE elements: 13
ChIP density(Case|Control): 59654.3012|5301.5976
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: ARHGAP1 ;
ROSE Overlap ATG13 ; ZNF408 ; ARHGAP1 ;
ROSE Proximal SNORD67 ; F2 ; HARBI1 ; ATG13 ;
ROSE Closest ARHGAP1 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA F2 ; AMBRA1 ; ZNF408 ; MIR5582 ; HARBI1 ; ATG13 ; ARHGAP1 ; SNORD67 ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_001000377 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers