SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_001000366
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Kidney
Biosample name: A-498_emptyvector
Genomic region: chr19:38829244-38865781
Size: 36537
Super-enhancer rank 366
Number of SE elements: 5
ChIP density(Case|Control): 58174.2114|2970.4581
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: HNRNPL ;
ROSE Overlap HNRNPL ; ECH1 ;
ROSE Proximal SIRT2 ; NFKBIB ; LGALS7B ; RINL ; LGALS4 ;
ROSE Closest HNRNPL ;
Lasso ;
PreSTIGE ;
ABC ;
BETA NFKBIB ; LGALS4 ; RINL ; SIRT2 ; ECH1 ; LGALS7B ; CCER2 ; HNRNPL ; LGALS7 ; SARS2 ; MRPS12 ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_001000366 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers