SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_001000354
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Kidney
Biosample name: A-498_emptyvector
Genomic region: chr21:43439641-43479785
Size: 40144
Super-enhancer rank 354
Number of SE elements: 8
ChIP density(Case|Control): 61376.1616|5559.944
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: C21ORF125 ;
ROSE Overlap C21orf125 ; C21orf84 ;
ROSE Proximal SIK1 ;
ROSE Closest C21orf125 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA LINC00313 ; LINC00319 ; SIK1 ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_001000354 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers