SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_001000338
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Kidney
Biosample name: A-498_emptyvector
Genomic region: chrX:154365928-154391381
Size: 25453
Super-enhancer rank 338
Number of SE elements: 8
ChIP density(Case|Control): 58685.516|1456.9671
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: EMD ;
ROSE Overlap FLNA ; EMD ;
ROSE Proximal ATP6AP1 ; TAZ ; DNASE1L1 ; RPL10 ; GDI1 ; SNORA70 ;
ROSE Closest EMD ;
Lasso ;
PreSTIGE ;
ABC ;
BETA RPL10 ; TKTL1 ; GDI1 ; LOC158960 ; DNASE1L1 ; SNORA70 ; MIR6858 ; TAZ ; FLNA ; ATP6AP1 ; TEX28 ; PLXNA3 ; EMD ; FAM50A ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_001000338 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers