SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_001000305
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Kidney
Biosample name: A-498_emptyvector
Genomic region: chr2:186568554-186593688
Size: 25134
Super-enhancer rank 305
Number of SE elements: 3
ChIP density(Case|Control): 63131.5812|2432.9712
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: ITGAV ;
ROSE Overlap ITGAV ;
ROSE Proximal ITGAV ;
ROSE Closest ITGAV ;
Lasso ;
PreSTIGE ;
ABC ;
BETA ITGAV ; ZC3H15 ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_001000305 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers