SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_001000300
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Kidney
Biosample name: A-498_emptyvector
Genomic region: chr9:35906756-35946188
Size: 39432
Super-enhancer rank 300
Number of SE elements: 10
ChIP density(Case|Control): 65263.9032|4325.6904
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: LOC158376 ;
ROSE Overlap LOC158376 ; HRCT1 ;
ROSE Proximal LOC92973 ; OR13J1 ; OR2S2 ;
ROSE Closest LOC158376 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA TMEM8B ; OR13J1 ; LINC00961 ; FAM221B ; HRCT1 ; LINC00950 ; OR2S2 ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_001000300 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers