SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_001000288
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Kidney
Biosample name: A-498_emptyvector
Genomic region: chr20:31590910-31611875
Size: 20965
Super-enhancer rank 288
Number of SE elements: 6
ChIP density(Case|Control): 64085.812|2153.1055
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: ID1 ;
ROSE Overlap ID1 ; MIR3193 ;
ROSE Proximal PSIMCT-1 ; COX4I2 ;
ROSE Closest ID1 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA ID1 ; HM13-AS1 ; MIR3193 ; HM13 ; COX4I2 ; MCTS2P ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_001000288 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers