SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_001000250
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Kidney
Biosample name: A-498_emptyvector
Genomic region: chr1:204408428-204439257
Size: 30829
Super-enhancer rank 250
Number of SE elements: 8
ChIP density(Case|Control): 69112.4522|2990.413
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: PPP1R15B ;
ROSE Overlap PPP1R15B ; PIK3C2B ;
ROSE Proximal PLEKHA6 ; LOC127841 ;
ROSE Closest PPP1R15B ;
Lasso ;
PreSTIGE ;
ABC ;
BETA MDM4 ; PPP1R15B ; PIK3C2B ; LINC00628 ; PLEKHA6 ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_001000250 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers