SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_001000247
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Kidney
Biosample name: A-498_emptyvector
Genomic region: chr9:26944804-26957789
Size: 12985
Super-enhancer rank 247
Number of SE elements: 1
ChIP density(Case|Control): 67179.196|693.399
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: PLAA ;
ROSE Overlap IFT74 ; PLAA ;
ROSE Proximal LRRC19 ;
ROSE Closest PLAA ;
Lasso ;
PreSTIGE ;
ABC ;
BETA CAAP1 ; IFT74 ; LRRC19 ; PLAA ; IFT74-AS1 ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_001000247 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers